Starting MWB2REDU script,.. 0%| | 0/3141 [00:00: Failed to establish a new connection: [Errno 101] Network is unreachable')) Rest length is 326 raw file key found. Initiating REDU-table generation for AN002013 Rest length is 326 raw file key found. ENVOEnvironmentBiome: ADDED! ENVOEnvironmentMaterial: ADDED! 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Try using .loc[row_indexer,col_indexer] = value instead See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy uberon_ontology_table['Label'] = uberon_ontology_table['Label'].astype(str) 16%|█▌ | 499/3141 [42:11<5:20:39, 7.28s/it] 16%|█▌ | 501/3141 [42:11<3:23:53, 4.63s/it] plasma_raw batch6 VT_190410_M380_161.raw plasma_raw batch6 VT_190410_M380_163.raw plasma_raw batch6 VT_190410_M380_165.raw plasma_raw batch6 VT_190410_M380_167.raw plasma_raw batch6 VT_190410_M380_169.raw plasma_raw batch6 VT_190410_M380_171.raw plasma_raw batch6 VT_190410_M380_173.raw plasma_raw batch6 VT_190410_M380_175.raw plasma_raw batch6 VT_190410_M380_177.raw plasma_raw batch6 VT_190410_M380_179.raw plasma_raw batch6 VT_190410_M380_181.raw plasma_raw batch6 VT_190410_M380_183.raw plasma_raw batch6 VT_190410_M380_185.raw plasma_raw batch6 VT_190410_M380_187.raw plasma_raw batch6 VT_190410_M380_189.raw plasma_raw batch6 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VT_190410_M380_239.raw plasma_raw batch6 VT_190410_M380_241.raw plasma_raw batch6 VT_190410_M380_243.raw plasma_raw batch6 VT_190410_M380_245.raw plasma_raw batch6 VT_190410_M380_247.raw plasma_raw batch6 VT_190410_M380_249.raw plasma_raw batch6 VT_190410_M380_251.raw plasma_raw batch6 VT_190410_M380_253.raw plasma_raw batch6 VT_190410_M380_255.raw plasma_raw batch6 VT_190410_M380_257.raw plasma_raw batch6 VT_190410_M380_259.raw plasma_raw batch6 VT_190410_M380_261.raw plasma_raw batch6 VT_190410_M380_263.raw plasma_raw batch6 VT_190410_M380_265.raw plasma_raw batch6 VT_190410_M380_267.raw plasma_raw batch6 VT_190410_M380_269.raw plasma_raw batch6 VT_190410_M380_271.raw plasma_raw batch6 VT_190410_M380_273.raw plasma_raw batch6 VT_190410_M380_275.raw plasma_raw batch6 VT_190410_M380_277.raw plasma_raw batch6 VT_190410_M380_279.raw plasma_raw batch6 VT_190410_M380_281.raw plasma_raw batch6 VT_190410_M380_283.raw plasma_raw batch6 VT_190410_M380_285.raw plasma_raw batch6 VT_190410_M380_287.raw plasma_raw batch7 VT_190411_M380_001.raw plasma_raw batch7 VT_190411_M380_003.raw plasma_raw batch7 VT_190411_M380_005.raw plasma_raw batch7 VT_190411_M380_007.raw plasma_raw batch7 VT_190411_M380_009.raw plasma_raw batch7 VT_190411_M380_011.raw plasma_raw batch7 VT_190411_M380_013.raw plasma_raw batch7 VT_190411_M380_015.raw plasma_raw batch7 VT_190411_M380_017.raw plasma_raw batch7 VT_190411_M380_019.raw plasma_raw batch7 VT_190411_M380_021.raw plasma_raw batch7 VT_190411_M380_023.raw plasma_raw batch7 VT_190411_M380_025.raw plasma_raw batch7 VT_190411_M380_027.raw plasma_raw batch7 VT_190411_M380_029.raw plasma_raw batch7 VT_190411_M380_031.raw plasma_raw batch7 VT_190411_M380_033.raw plasma_raw batch7 VT_190411_M380_035.raw plasma_raw batch7 VT_190411_M380_037.raw plasma_raw batch7 VT_190411_M380_039.raw plasma_raw batch7 VT_190411_M380_041.raw plasma_raw batch7 VT_190411_M380_043.raw plasma_raw batch7 VT_190411_M380_045.raw plasma_raw batch7 VT_190411_M380_047.raw plasma_raw batch7 VT_190411_M380_049.raw plasma_raw batch7 VT_190411_M380_051.raw plasma_raw batch7 VT_190411_M380_053.raw plasma_raw batch7 VT_190411_M380_055.raw plasma_raw batch7 VT_190411_M380_057.raw plasma_raw batch7 VT_190411_M380_059.raw plasma_raw batch7 VT_190411_M380_061.raw plasma_raw batch7 VT_190411_M380_063.raw plasma_raw batch7 VT_190411_M380_065.raw plasma_raw batch7 VT_190411_M380_067.raw plasma_raw batch7 VT_190411_M380_069.raw plasma_raw batch7 VT_190411_M380_071.raw plasma_raw batch7 VT_190411_M380_073.raw plasma_raw batch7 VT_190411_M380_075.raw plasma_raw batch7 VT_190411_M380_077.raw plasma_raw batch7 VT_190411_M380_079.raw plasma_raw batch7 VT_190411_M380_081.raw plasma_raw batch7 VT_190411_M380_083.raw plasma_raw batch7 VT_190411_M380_085.raw plasma_raw batch7 VT_190411_M380_087.raw plasma_raw batch7 VT_190411_M380_089.raw plasma_raw batch7 VT_190411_M380_091.raw plasma_raw batch7 VT_190411_M380_093.raw plasma_raw batch7 VT_190411_M380_095.raw plasma_raw batch7 VT_190411_M380_097.raw plasma_raw batch7 VT_190411_M380_099.raw plasma_raw batch7 VT_190411_M380_101.raw plasma_raw batch7 VT_190411_M380_103.raw plasma_raw batch7 VT_190411_M380_105.raw plasma_raw batch7 VT_190411_M380_107.raw plasma_raw batch7 VT_190411_M380_109.raw plasma_raw batch7 VT_190411_M380_111.raw plasma_raw batch7 VT_190411_M380_113.raw plasma_raw batch7 VT_190411_M380_115.raw plasma_raw batch7 VT_190411_M380_117.raw plasma_raw batch7 VT_190411_M380_119.raw plasma_raw batch7 VT_190411_M380_121.raw plasma_raw batch7 VT_190411_M380_123.raw plasma_raw batch7 VT_190411_M380_125.raw plasma_raw batch7 VT_190411_M380_127.raw plasma_raw batch7 VT_190411_M380_129.raw plasma_raw batch7 VT_190411_M380_131.raw plasma_raw batch7 VT_190411_M380_133.raw plasma_raw batch7 VT_190411_M380_135.raw plasma_raw batch7 VT_190411_M380_137.raw plasma_raw batch7 VT_190411_M380_139.raw plasma_raw batch7 VT_190411_M380_141.raw plasma_raw batch7 VT_190411_M380_143.raw plasma_raw batch7 VT_190411_M380_145.raw plasma_raw batch7 VT_190411_M380_147.raw plasma_raw batch7 VT_190411_M380_149.raw plasma_raw batch7 VT_190411_M380_151.raw plasma_raw batch7 VT_190411_M380_153.raw plasma_raw batch7 VT_190411_M380_155.raw plasma_raw batch7 VT_190411_M380_157.raw plasma_raw batch7 VT_190411_M380_159.raw plasma_raw batch7 VT_190411_M380_161.raw plasma_raw batch7 VT_190411_M380_163.raw plasma_raw batch7 VT_190411_M380_165.raw plasma_raw batch7 VT_190411_M380_167.raw plasma_raw batch7 VT_190411_M380_169.raw plasma_raw batch7 VT_190411_M380_171.raw plasma_raw batch7 VT_190411_M380_173.raw plasma_raw batch7 VT_190411_M380_175.raw plasma_raw batch7 VT_190411_M380_177.raw plasma_raw batch7 VT_190411_M380_179.raw plasma_raw batch7 VT_190411_M380_181.raw plasma_raw batch7 VT_190411_M380_183.raw plasma_raw batch7 VT_190411_M380_185.raw plasma_raw batch7 VT_190411_M380_187.raw plasma_raw batch7 VT_190411_M380_189.raw plasma_raw batch7 VT_190411_M380_191.raw plasma_raw batch7 VT_190411_M380_193.raw plasma_raw batch7 VT_190411_M380_195.raw plasma_raw batch7 VT_190411_M380_197.raw plasma_raw batch7 VT_190411_M380_199.raw plasma_raw batch7 VT_190411_M380_201.raw plasma_raw batch7 VT_190411_M380_203.raw plasma_raw batch7 VT_190411_M380_205.raw plasma_raw batch7 VT_190411_M380_207.raw plasma_raw batch7 VT_190411_M380_209.raw plasma_raw batch7 VT_190411_M380_211.raw plasma_raw batch7 VT_190411_M380_213.raw plasma_raw batch7 VT_190411_M380_215.raw plasma_raw batch7 VT_190411_M380_217.raw plasma_raw batch7 VT_190411_M380_219.raw plasma_raw batch7 VT_190411_M380_221.raw IGNORED: positive_polarity_count IGNORED: negative_polarity_count Number of rows removed due to not enough metadata: 0 Returning 996 rows! Extracted information for 996 samples. Processing ST000740 No raw data detected. Ignoring ST000740 Processing ST001447 This is not an MS-analysis. Ignoring AN002418 Processing ST000082 No raw data detected. Ignoring ST000082 Processing ST002937 Initiating REDU-table generation for AN004817 Rest length is 962 raw file key found. found filename_raw to filename_base match Initiating REDU-table generation for AN004818 Rest length is 962 raw file key found. found filename_raw to filename_base match Initiating REDU-table generation for AN004819 Rest length is 962 raw file key found. found filename_raw to filename_base match Initiating REDU-table generation for AN004820 Rest length is 962 raw file key found. found filename_raw to filename_base match Initiating REDU-table generation for AN004821 Rest length is 962 raw file key found. found filename_raw to filename_base match Initiating REDU-table generation for AN004822 Rest length is 962 raw file key found. found filename_raw to filename_base match ENVOEnvironmentBiome: ADDED! ENVOEnvironmentMaterial: ADDED! SubjectIdentifierAsRecorded: : missing value 1.raw 10.raw 100.raw 101.raw 101A.raw 102.raw 103.raw 104.raw 105.raw 106.raw 107.raw 108.raw 108A.raw 108V.raw 109.raw 11.raw 110.raw 111.raw 112.raw 113.raw 114.raw 115.raw 116.raw 117.raw 118.raw 119.raw 12.raw 120.raw 121.raw 122.raw 123.raw 124.raw 125.raw 126.raw 127.raw 128.raw 129.raw 129V.raw 13.raw 130.raw 131.raw 132.raw 133.raw 134.raw 134A.raw 135.raw 136.raw 137.raw 138.raw 139.raw 14.raw 140.raw 140V.raw 141.raw 142.raw 143.raw 144.raw 145.raw 146.raw 147.raw 147A.raw 148.raw 149.raw 15.raw 150.raw 151.raw 152.raw 153.raw 154.raw 155.raw 156.raw 157.raw 158.raw 159.raw 16.raw 160.raw 161.raw 162.raw 163.raw 164.raw 165.raw 166.raw 167.raw 168.raw 169.raw 17.raw 170.raw 171.raw 172.raw 173.raw 174.raw 175.raw 176.raw 177.raw 178.raw 179.raw 18.raw 180.raw 181.raw 182.raw 183.raw 184.raw 185.raw 186.raw 187.raw 188.raw 189.raw 19.raw 190.raw 191.raw 192.raw 193.raw 194.raw 195.raw 196.raw 197.raw 198.raw 199.raw 2.raw 20.raw 200.raw 201.raw 202.raw 203.raw 204.raw 205.raw 206.raw 207.raw 207V.raw 208.raw 209.raw 20V.raw 21.raw 210.raw 211.raw 212.raw 213.raw 214.raw 215.raw 215A.raw 216.raw 217.raw 218.raw 219.raw 22.raw 220.raw 221.raw 222.raw 222V.raw 223.raw 224.raw 225.raw 226.raw 227.raw 228.raw 229.raw 23.raw 230.raw 231.raw 232.raw 233.raw 234.raw 235.raw 236.raw 237.raw 238.raw 239.raw 24.raw 240.raw 241.raw 242.raw 243.raw 244.raw 245.raw 246.raw 247.raw 248.raw 249.raw 25.raw 250.raw 251.raw 252.raw 253.raw 254.raw 255.raw 256.raw 257.raw 258.raw 259.raw 26.raw 260.raw 261.raw 262.raw 263.raw 264.raw 265.raw 266.raw 267.raw 268.raw 269.raw 27.raw 270.raw 271.raw 272.raw 273.raw 274.raw 275.raw 276.raw 277.raw 278.raw 279.raw 28.raw 280.raw 281.raw 282.raw 283.raw 284.raw 285.raw 286.raw 287.raw 288.raw 289.raw 29.raw 290.raw 291.raw 292.raw 293.raw 294.raw 295.raw 296.raw 297.raw 298.raw 299.raw 3.raw 30.raw 300.raw 301.raw 302.raw 303.raw 304.raw 305.raw 306.raw 307.raw 308.raw 309.raw 31.raw 310.raw 311.raw 312.raw 313.raw 314.raw 315.raw 316.raw 317.raw 318.raw 319.raw 32.raw 320.raw 321.raw 322.raw 323.raw 324.raw 325.raw 326.raw 327.raw 328.raw 329.raw 33.raw 330.raw 331.raw 332.raw 333.raw 334.raw 335.raw 336.raw 337.raw 338.raw 339.raw 34.raw 340.raw 341.raw 342.raw 343.raw 344.raw 345.raw 346.raw 347.raw 348.raw 349.raw 35.raw 350.raw 351.raw 352.raw 353.raw 354.raw 355.raw 356.raw 357.raw 358.raw 359.raw 36.raw 360.raw 361.raw 362.raw 363.raw 364.raw 365.raw 366.raw 367.raw 368.raw 369.raw 37.raw 370.raw 371.raw 372.raw 373.raw 374.raw 375.raw 376.raw 377.raw 378.raw 379.raw 38.raw 380.raw 381.raw 382.raw 383.raw 384.raw 385.raw 386.raw 387.raw 388.raw 389.raw 39.raw 390.raw 391.raw 392.raw 393.raw 394.raw 395.raw 396.raw 397.raw 398.raw 399.raw 4.raw 40.raw 400.raw 401.raw 402.raw 403.raw 404.raw 405.raw 406.raw 407.raw 408.raw 409.raw 41.raw 410.raw 411.raw 412.raw 413.raw 414.raw 415.raw 416.raw 417.raw 418.raw 419.raw 42.raw 420.raw 421.raw 422.raw 423.raw 424.raw 425.raw 426.raw 427.raw 428.raw 429.raw 43.raw 430.raw 431.raw 432.raw 433.raw 434.raw 435.raw 436.raw 437.raw 438.raw 439.raw 44.raw 440.raw 441.raw 442.raw 443.raw 444.raw 445.raw 446.raw 447.raw 448.raw 449.raw 45.raw 450.raw 451.raw 452.raw 453.raw 454.raw 455.raw 456.raw 457.raw 458.raw 459.raw 46.raw 460.raw 461.raw 462.raw 463.raw 464.raw 465.raw 466.raw 467.raw 468.raw 469.raw 47.raw 470.raw 471.raw 472.raw 473.raw 474.raw 475.raw 476.raw 477.raw 478.raw 48.raw 49.raw 5.raw 50.raw 51.raw 52.raw 53.raw 54.raw 55.raw 56.raw 57.raw 57A.raw 57V.raw 58.raw 59.raw 6.raw 60.raw 61.raw 62.raw 63.raw 64.raw 65.raw 66.raw 66V.raw 67.raw 68.raw 69.raw 7.raw 70.raw 71.raw 71A.raw 72.raw 73.raw 74.raw 75.raw 76.raw 77.raw 78.raw 79.raw 7A.raw 8.raw 80.raw 81.raw 82.raw 83.raw 84.raw 85.raw 86.raw 87.raw 88.raw 89.raw 9.raw 90.raw 91.raw 92.raw 92V.raw 93.raw 94.raw 95.raw 96.raw 97.raw 98.raw 99.raw CB001-A.raw CB001-V.raw CB002-A.raw CB002-V.raw CB003-A.raw CB003-V.raw CB004-A.raw CB004-V.raw CB006-A.raw CB006-V.raw CB007-A.raw CB007-V.raw CB008-A.raw CB008-V.raw CB009-A.raw CB009-V.raw CB010-A.raw CB010-V.raw CB011-A.raw CB011-V.raw CB013-A.raw CB013-V.raw CB014-A.raw CB014-V.raw CB016-A.raw CB016-V.raw CB017-A.raw CB017-V.raw CB018-A.raw CB018-V.raw CB019-A.raw CB019-V.raw CB020-A.raw CB020-V.raw CB021-A.raw CB021-V.raw CB022-A.raw CB022-V.raw CB023-A.raw CB023-V.raw CB024-A.raw CB024-V.raw CB025-A.raw CB025-V.raw CB026-A.raw CB026-V.raw CB027-A.raw CB027-V.raw CB028-A.raw CB028-V.raw CB029-A.raw CB029-V.raw CB030-A.raw CB030-V.raw CB031-A.raw CB031-V.raw CB032-A.raw CB032-V.raw CB033-A.raw CB033-V.raw CB034-A.raw CB034-V.raw CB035-A.raw CB035-V.raw CB036-A.raw CB036-V.raw CB037-A.raw CB037-V.raw CB038-A.raw CB038-V.raw CB039-A.raw CB039-V.raw CB040-A.raw CB040-V.raw CB041-A.raw CB041-V.raw CB042-A.raw CB042-V.raw CB043-A.raw CB043-V.raw CB044-A.raw CB044-V.raw CB045-A.raw CB045-V.raw CB046-A.raw CB046-V.raw CB047-A.raw CB047-V.raw CB048-A.raw CB048-V.raw CB049-A.raw CB049-V.raw CB050-A.raw CB050-V.raw CB051-A.raw CB051-V.raw CB052-A.raw CB052-V.raw CB053-A.raw CB053-V.raw CB054-A.raw CB054-V.raw CB055-A.raw CB055-V.raw CB056-A.raw CB056-V.raw CB057-A.raw CB057-V.raw CB058-A.raw CB058-V.raw CB059-A.raw CB059-V.raw CB060-A.raw CB060-V.raw CB061-A.raw CB061-V.raw CB062-A.raw CB062-V.raw CB063-A.raw CB063-V.raw CB064-A.raw CB064-V.raw CB065-A.raw CB065-V.raw CB066-A.raw CB066-V.raw CB067-A.raw CB067-V.raw CB068-A.raw CB068-V.raw CB069-A.raw CB069-V.raw CB070-A.raw CB070-V.raw CB071-A.raw CB071-V.raw CB072-A.raw CB072-V.raw CB073-A.raw CB073-V.raw CB074-A.raw CB074-V.raw CB075-A.raw CB075-V.raw CB076-A.raw CB076-V.raw CB077-A.raw CB077-V.raw CB078-A.raw CB078-V.raw CB079-A.raw CB079-V.raw CB080-A.raw CB080-V.raw CB081-A.raw CB081-V.raw CB082-A.raw CB082-V.raw CB083-A.raw CB083-V.raw CB084-A.raw CB084-V.raw CB085-A.raw CB085-V.raw CB086-A.raw CB086-V.raw CB087-A.raw CB087-V.raw CB088-A.raw CB088-V.raw CB089-A.raw CB089-V.raw CB090-A.raw CB090-V.raw CB091-V.raw CB092-V.raw CB093-A.raw CB093-V.raw CB094-V.raw CB095-V.raw CB096-A.raw CB096-V.raw CB097-V.raw CB098-A.raw CB098-V.raw CB099-A.raw CB099-V.raw CB100-A.raw CB100-V.raw CB101-A.raw CB101-V.raw CB102-V.raw CB103-A.raw CB103-V.raw CB104-A.raw CB104-V.raw CB105-A.raw CB105-V.raw CB106-A.raw CB106-V.raw CB107-A.raw CB107-V.raw CB108-A.raw CB108-V.raw CB109-V.raw CB110-A.raw CB110-V.raw CB111-A.raw CB111-V.raw CB112-A.raw CB112-V.raw CB113-A.raw CB113-V.raw CB114-A.raw CB114-V.raw CB115-A.raw CB115-V.raw CB116-A.raw CB116-V.raw CB117-A.raw CB117-V.raw CB118-V.raw CB119-A.raw CB119-V.raw CB120-V.raw CB121-A.raw CB121-V.raw CB122-V.raw CB123-V.raw CB124-A.raw CB124-V.raw CB125-V.raw CB126-A.raw CB126-V.raw CB127-A.raw CB127-V.raw CB128-V.raw CB129-A.raw CB129-V.raw CB130-A.raw CB130-V.raw CB131-A.raw CB131-V.raw CB132-A.raw CB132-V.raw CB133-V.raw CB134-A.raw CB134-V.raw CB135-A.raw CB135-V.raw CB136-A.raw CB136-V.raw CB137-V.raw CB138-A.raw CB138-V.raw CB139-V.raw CB140-V.raw CB141-A.raw CB141-V.raw CB142-V.raw CB143-A.raw CB143-V.raw CB144-A.raw CB144-V.raw CB145-A.raw CB145-V.raw CB146-V.raw CB147-A.raw CB147-V.raw CB148-V.raw CB149-A.raw CB149-V.raw CB150-V.raw CB151-V.raw CB152-V.raw CB153-V.raw CB154-V.raw CB155-A.raw CB155-V.raw CB156-V.raw CB157-A.raw CB157-V.raw CB158-V.raw CB159-A.raw CB159-V.raw CB160-A.raw CB160-V.raw CB161-A.raw CB161-V.raw CB162-A.raw CB162-V.raw CB163-V.raw CB164-V.raw CB165-A.raw CB165-V.raw CB166-A.raw CB166-V.raw CB167-A.raw CB167-V.raw CB168-A.raw CB168-V.raw CB169-V.raw CB170-A.raw CB170-V.raw CB171-V.raw CB172-A.raw CB172-V.raw CB173-A.raw CB173-V.raw CB174-A.raw CB174-V.raw CB175-A.raw CB175-V.raw CB176-A.raw CB176-V.raw CB177-V.raw CB178-A.raw CB178-V.raw CB179-A.raw CB179-V.raw CB180-V.raw CB181-V.raw CB182-V.raw CB183-A.raw CB183-V.raw CB184-A.raw CB184-V.raw CB185-V.raw CB186-V.raw CB187-A.raw CB187-V.raw CB188-A.raw CB188-V.raw CB189-V.raw CB190-A.raw CB190-V.raw CB191-V.raw CB192-A.raw CB192-V.raw CB193-V.raw CB194-A.raw CB194-V.raw/app/workflows/PublicDataset_ReDU_Metadata_Workflow/bin/read_and_validate_redu_from_github.py:30: SettingWithCopyWarning: A value is trying to be set on a copy of a slice from a DataFrame. Try using .loc[row_indexer,col_indexer] = value instead See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy uberon_ontology_table['Label'] = uberon_ontology_table['Label'].astype(str) 16%|█▌ | 503/3141 [42:31<4:43:22, 6.45s/it]/app/workflows/PublicDataset_ReDU_Metadata_Workflow/bin/read_and_validate_redu_from_github.py:30: SettingWithCopyWarning: A value is trying to be set on a copy of a slice from a DataFrame. Try using .loc[row_indexer,col_indexer] = value instead See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy uberon_ontology_table['Label'] = uberon_ontology_table['Label'].astype(str) 16%|█▌ | 504/3141 [42:35<4:22:59, 5.98s/it]/app/workflows/PublicDataset_ReDU_Metadata_Workflow/bin/read_and_validate_redu_from_github.py:30: SettingWithCopyWarning: A value is trying to be set on a copy of a slice from a DataFrame. Try using .loc[row_indexer,col_indexer] = value instead See the caveats in the documentation: https://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#returning-a-view-versus-a-copy uberon_ontology_table['Label'] = uberon_ontology_table['Label'].astype(str) 16%|█▌ | 506/3141 [42:44<3:59:36, 5.46s/it] CB195-A.raw CB195-V.raw CB196-A.raw CB196-V.raw CB197-V.raw CB198-A.raw CB198-V.raw CB199-A.raw CB199-V.raw CB200-A.raw CB200-V.raw CB201-A.raw CB201-V.raw CB202-V.raw CB203-V.raw CB204-A.raw CB204-V.raw CB205-A.raw CB205-V.raw CB206-V.raw CB207-V.raw CB208-V.raw CB209-A.raw CB209-V.raw CB210-V.raw CB211-A.raw CB211-V.raw CB212-A.raw CB212-V.raw CB213-A.raw CB213-V.raw CB214-A.raw CB214-V.raw CB215-A.raw CB215-V.raw CB216-A.raw CB216-V.raw CB217-A.raw CB217-V.raw CB218-A.raw CB218-V.raw CB219-V.raw CB220-V.raw CB221-A.raw CB221-V.raw CB222-A.raw CB223-V.raw CB224-A.raw CB224-V.raw CB225-A.raw CB225-V.raw CB226-A.raw CB226-V.raw CB227-A.raw CB227-V.raw CB228-A.raw CB228-V.raw CB229-V.raw CB230-A.raw CB230-V.raw CB231-A.raw CB231-V.raw CB232-V.raw CB233-V.raw CB234-V.raw CB235-A.raw CB235-V.raw CB236-A.raw CB236-V.raw CB237-A.raw CB237-V.raw CB238-A.raw CB238-V.raw CB239-V.raw CB240-V.raw CB241-V.raw CB242-A.raw CB242-V.raw CB243-A.raw CB243-V.raw CB244-A.raw CB244-V.raw CB245-V.raw CB246-A.raw CB246-V.raw CB247-V.raw CB248-A.raw CB248-V.raw CB249-A.raw CB249-V.raw CB250-V.raw CB251-V.raw CB252-A.raw CB252-V.raw CB253-A.raw CB253-V.raw CB254-V.raw CB255-A.raw CB255-V.raw CB256-A.raw CB256-V.raw CB257-A.raw CB257-V.raw CB258-A.raw CB258-V.raw CB259-A.raw CB259-V.raw CB260-A.raw CB260-V.raw CB261-V.raw CB262-V.raw CB263-V.raw CB264-A.raw CB264-V.raw CB265-A.raw CB265-V.raw CB266-V.raw CB267-V.raw CB268-V.raw CB269-A.raw CB269-V.raw Cb222-V.raw IGNORED: positive_polarity_count IGNORED: negative_polarity_count Number of rows removed due to not enough metadata: 0 Returning 959 rows! Extracted information for 959 samples. Processing ST000054 Initiating REDU-table generation for AN000092 Rest length is 192 raw file key found. found filename_raw to filename_base match ENVOEnvironmentBiome: ADDED! ENVOEnvironmentMaterial: ADDED! SubjectIdentifierAsRecorded: : missing value 1402110jcsa02_1.cdf 1402110jcsa03_1.cdf 1402110jcsa04_1.cdf 1402110jcsa05_1.cdf 1402110jcsa06_1.cdf 1402110jcsa07_1.cdf 1402110jcsa08_1.cdf 1402110jcsa09_1.cdf 1402110jcsa10_1.cdf 1402110jcsa11_1.cdf 1402110jcsa12_1.cdf 1402110jcsa13_1.cdf 1402110jcsa14_1.cdf 1402110jcsa15_1.cdf 1402110jcsa16_1.cdf 1402110jcsa17_1.cdf 1402110jcsa18_1.cdf 1402110jcsa19_1.cdf 1402110jcsa20_1.cdf 1402110jcsa21_1.cdf 1402110jcsa22_1.cdf 1402110jcsa23_1.cdf 1402110jcsa24_1.cdf 1402110jcsa25_1.cdf 1402110jcsa26_1.cdf 1402110jcsa27_1.cdf 1402110jcsa28_1.cdf 1402110jcsa29_1.cdf 1402110jcsa30_1.cdf 1402110jcsa31_1.cdf 1402110jcsa32_1.cdf 1402110jcsa33_1.cdf 1402110jcsa34_1.cdf 1402110jcsa35_1.cdf 1402110jcsa36_1.cdf 1402110jcsa37_1.cdf 1402110jcsa38_1.cdf 1402110jcsa39_1.cdf 1402110jcsa40_1.cdf 1402110jcsa41_1.cdf 1402110jcsa42_1.cdf 1402110jcsa43_1.cdf 1402110jcsa44_1.cdf 1402110jcsa45_1.cdf 1402110jcsa46_1.cdf 1402110jcsa47_1.cdf 1402110jcsa48_1.cdf 140214ajcsa02_1.cdf 140214ajcsa03_1.cdf 140214ajcsa04_1.cdf 140214ajcsa05_1.cdf 140214ajcsa06_1.cdf 140214ajcsa07_1.cdf 140214ajcsa08_1.cdf 140214ajcsa09_1.cdf 140214ajcsa10_1.cdf 140214ajcsa11_1.cdf 140214ajcsa12_1.cdf 140214ajcsa13_1.cdf 140214ajcsa14_1.cdf 140214ajcsa15_1.cdf 140214ajcsa16_1.cdf 140214ajcsa17_1.cdf 140214ajcsa18_1.cdf 140214ajcsa19_1.cdf 140214ajcsa20_1.cdf 140214ajcsa21_1.cdf 140214ajcsa22_1.cdf 140214ajcsa23_1.cdf 140214ajcsa24_1.cdf 140214ajcsa25_1.cdf 140214ajcsa26_1.cdf 140214ajcsa27_1.cdf 140214ajcsa28_1.cdf 140214ajcsa29_1.cdf 140214ajcsa30_1.cdf 140214ajcsa31_1.cdf 140214ajcsa32_1.cdf 140214ajcsa33_1.cdf 140214ajcsa34_1.cdf 140214ajcsa35_1.cdf 140214ajcsa36_1.cdf 140214ajcsa37_1.cdf 140214ajcsa38_1.cdf 140214ajcsa39_1.cdf 140214ajcsa40_1.cdf 140214ajcsa41_1.cdf 140214ajcsa42_1.cdf 140214ajcsa43_1.cdf 140214ajcsa44_1.cdf 140214ajcsa45_1.cdf 140214ajcsa46_1.cdf 140214ajcsa47_1.cdf 140214ajcsa48_1.cdf 140217ajcsa02_1.cdf 140217ajcsa03_1.cdf 140217ajcsa04_1.cdf 140217ajcsa05_1.cdf 140217ajcsa06_1.cdf 140217ajcsa07_1.cdf 140217ajcsa08_1.cdf 140217ajcsa09_1.cdf 140217ajcsa10_1.cdf 140217ajcsa11_1.cdf 140217ajcsa12_1.cdf 140217ajcsa13_1.cdf 140217ajcsa14_1.cdf 140217ajcsa15_1.cdf 140217ajcsa16_1.cdf 140217ajcsa17_1.cdf 140217ajcsa18_1.cdf 140217ajcsa19_1.cdf 140217ajcsa20_1.cdf 140217ajcsa21_1.cdf 140217ajcsa22_1.cdf 140217ajcsa23_1.cdf 140217ajcsa24_1.cdf 140217ajcsa25_1.cdf 140217ajcsa26_1.cdf 140217ajcsa27_1.cdf 140217ajcsa28_1.cdf 140217ajcsa29_1.cdf 140217ajcsa30_1.cdf 140217ajcsa31_1.cdf 140217ajcsa32_1.cdf 140217ajcsa33_1.cdf 140217ajcsa34_1.cdf 140217ajcsa35_1.cdf 140217ajcsa36_1.cdf 140217ajcsa37_1.cdf 140217ajcsa38_1.cdf 140217ajcsa39_1.cdf 140217ajcsa40_1.cdf 140217ajcsa41_1.cdf 140217ajcsa42_1.cdf 140217ajcsa43_1.cdf 140217ajcsa44_1.cdf 140217ajcsa45_1.cdf 140217ajcsa46_1.cdf 140217ajcsa47_1.cdf 140217ajcsa48_1.cdf 140219ajcsa02_1.cdf 140219ajcsa03_1.cdf 140219ajcsa04_1.cdf 140219ajcsa05_1.cdf 140219ajcsa06_1.cdf 140219ajcsa07_1.cdf 140219ajcsa08_1.cdf 140219ajcsa09_1.cdf 140219ajcsa10_1.cdf 140219ajcsa11_1.cdf 140219ajcsa12_1.cdf 140219ajcsa13_1.cdf 140219ajcsa14_1.cdf 140219ajcsa15_1.cdf 140219ajcsa16_1.cdf 140219ajcsa17_1.cdf 140219ajcsa18_1.cdf 140219ajcsa19_1.cdf 140219ajcsa20_1.cdf 140219ajcsa21_1.cdf 140219ajcsa22_1.cdf 140219ajcsa23_1.cdf 140219ajcsa24_1.cdf 140219ajcsa25_1.cdf 140219ajcsa26_1.cdf 140219ajcsa27_1.cdf 140219ajcsa28_1.cdf 140219ajcsa29_1.cdf 140219ajcsa30_1.cdf 140219ajcsa31_1.cdf 140219ajcsa32_1.cdf 140219ajcsa33_1.cdf 140219ajcsa34_1.cdf 140219ajcsa35_1.cdf 140219ajcsa36_1.cdf 140219ajcsa37_1.cdf 140219ajcsa38_1.cdf 140219ajcsa39_1.cdf 140219ajcsa40_1.cdf 140219ajcsa41_1.cdf 140219ajcsa42_1.cdf 140219ajcsa43_1.cdf 140219ajcsa44_1.cdf 140219ajcsa45_1.cdf 140219ajcsa46_1.cdf 140219ajcsa50_1.cdf 140219ajcsa51_1.cdf 140219ajcsa52_1.cdf 140219ajcsa53_1.cdf 140219ajcsa54_1.cdf 140219ajcsa55_1.cdf IGNORED: positive_polarity_count IGNORED: negative_polarity_count Number of rows removed due to not enough metadata: 0 Returning 192 rows! Extracted information for 192 samples. Processing ST000313 No raw data detected. Ignoring ST000313 Processing ST000118 Initiating REDU-table generation for AN000199 Rest length is 29 no raw file key found. raw file key found. ENVOEnvironmentBiome: ADDED! ENVOEnvironmentMaterial: ADDED! SubjectIdentifierAsRecorded: : missing value ST000118 GCTOF netcdf 140721bjlsa03_1.cdf ST000118 GCTOF netcdf 140721bjlsa05_1.cdf ST000118 GCTOF netcdf 140721bjlsa06_1.cdf ST000118 GCTOF netcdf 140721bjlsa08_1.cdf ST000118 GCTOF netcdf 140721bjlsa09_1.cdf ST000118 GCTOF netcdf 140721bjlsa12_1.cdf ST000118 GCTOF netcdf 140721bjlsa15_1.cdf ST000118 GCTOF netcdf 140721bjlsa17_1.cdf ST000118 GCTOF netcdf 140721bjlsa19_1.cdf ST000118 GCTOF netcdf 140721bjlsa21_1.cdf ST000118 GCTOF netcdf 140721bjlsa22_1.cdf ST000118 GCTOF netcdf 140721bjlsa23_1.cdf ST000118 GCTOF netcdf 140721bjlsa24_1.cdf ST000118 GCTOF netcdf 140721bjlsa25_1.cdf ST000118 GCTOF netcdf 140721bjlsa33_1.cdf ST000118 GCTOF netcdf 140721bjlsa34_1.cdf ST000118 GCTOF netcdf 140721bjlsa36_1.cdf ST000118 GCTOF netcdf 140721bjlsa38_1.cdf ST000118 GCTOF netcdf 140721bjlsa42_1.cdf ST000118 GCTOF netcdf 140721bjlsa44_1.cdf ST000118 GCTOF netcdf 140721bjlsa45_1.cdf ST000118 GCTOF netcdf 140721bjlsa46_1.cdf ST000118 GCTOF netcdf 140721bjlsa47_1.cdf ST000118 GCTOF netcdf 140721bjlsa50_1.cdf ST000118 GCTOF netcdf 140722bjlsa02_1.cdf ST000118 GCTOF netcdf 140722bjlsa04_1.cdf ST000118 GCTOF netcdf 140722bjlsa06_1.cdf ST000118 GCTOF netcdf 140722bjlsa07_1.cdf ST000118 GCTOF netcdf 140722bjlsa10_1.cdf IGNORED: positive_polarity_count IGNORED: negative_polarity_count Number of rows removed due to not enough metadata: 0 Returning 29 rows! Extracted information for 29 samples. Processing ST001341 Initiating REDU-table generation for AN002235 Rest length is 48 raw file key found. use from match_df: filename_base_wo_extension use from raw_file_name_df: filename_base_wo_extension getting substring matches,.. Mapping potential matches: 0%| | 0/48 [00:00